Identification and Antibiosis of a Novel Actinomycete Strain RAF-11 Isolated From Iraqi Soil.

Authors

  • Rabah Forar Laidi Microbiology
  • A ABDERRAHMANE
  • A A. HOCINE NORYA

Keywords:

Actinomycetes, identification, antimicrbial activity, strain RAF-11, Streptomyces.

Abstract

A total of 35 actinomycetes strains were isolated from and around Baghdad, Iraq, at a depth of 5-10 m, by serial dilution agar plating method.

Author Biography

Rabah Forar Laidi, Microbiology

Department of Biological Sciences.ENS KOUBA- Algiers , A lgeria.

References

Antibiotic Resistance Threats in the United States, U.S, Department of Health and Human Services. 2013. Centers for Disease, Control and Prevention. Available at: http://www.cdc.gov/drugresistance/threat-report-2013/pdf/ar-threats-2013-508.pdf

Jain, P., Amatullah, A., Alam Rajib, S. and Reza, H. M. (2012). Antibiotic resistance and chromium reduction pattern among actinomycetes. American J. Biochem. Biotechnol, 8(2), Jun, pp. 111-117.

Labeda, D. P., Goodfellow, Brown, M. R., Ward, A. C., Lanoot , B. Vanncanneyt, M and 16 others. (2011). Phylogenetic study of the species within the family Streptomycetaceae. Antonie van Leeuwenhoek, pp. 9656-0.

Lee J.Y. and Hwang, B.K. (2002). Diversity of antifungal actinomycetes in various vegetative soils of Korea. Can. J. Microbiol., 48(5), May, pp. 407-417..

Tsao, P. H. Liben, C. and Kitt, G. W. (1960). An enrichment for isolating actinomycetes that produce diffusable antifungal antibiotics. Phytopathology, 50(1), pp. 88-89.

El-Nakeeb, M. A. and Lechevalier, H. A. (2002). Selective isolation of aerobic actinomycetes. Applied Microbiol. 1(2), March, pp. 75-77.

Johnson, L.F., Curl, E.A., Bond J.H. and Fribourg, H.A. (1959). Methods for studying soil microflora-plant disease relationships. Burgess, Minneapolis, U.S.A. 1959.

K

Hopwood, D. A., Bibb, M. J., Chater, K. F. and 7 other authors. (1985). Genetic Manipulation of Streptomyces. A Laboratory Manual. Norwish: The John Innes Foundation. Camb. 48, pp. 201-207.

Wu, R.Y. (1984). Studies on the Streptomyces SC4. II- Taxonomical and biological characteristics of Streptomyces strain SC4. Bot. Bull. Acad. Sci., 25, pp. 111-123.

Shirling, E.B. and Gottlieb, D. (1966). Methods for characterization of Streptomyces sp. Int. J. Syst. Bacteriol. 16(3), July, pp. 313-340.

K

Pridham, T.G., Lyons, A.J. and Pronpatima, B. (1973).Viability of actinomycetales stored in soil. Appl. Microbiol., 26, pp. 441-442.

Tadashi, A. (1975). Culture media for actinomycetes. The society for actinomycetes. Japan National Agricultural Lib. 1:31.

Kenneth, L. K. (1958). Prepared research paper RP 2911, Central Natations for the Revised ISCC-NBS color name blocks. J. Res. NBS, 61(5), November, pp. 428-43.

Tresner, H.D., Davies, M.C. and Backus, E.J. (1961). Electron microscopy of Streptomyces spores morphology and its role in species differentiation. J. Bacteriol, 81(1): pp. 70-80.

Becker, B., Lechevalier, M. P., Gordon, R. E. and Lechevalier, H. A., (1964). Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole cell hydrolysates. Appl. Microbiol, 12(5), September, pp. 421

Becker, B., Lechevalier, M.P. and Lechevalier, H.A. (1965). Chemical composition of cell-wall preparation from strains of various form-genera of aerobic actinomycetes. Appl. Microbiol, 13(2), March, pp.236-243.

Lechevalier, M. P. and Lechevalier H. A. (1970). Chemical composition as a criterion in the classification of aerobic actinomycete. Int. J. Syst. Bacteriol, 20, pp. 435

Shirling, E.B. and Gottlieb, D. (1964). Methods manual: International Cooperative Project for Description and Deposition of type cultures of streptomycete. 1-27 U.S.A. X.

Pridham, T. G. and Gottlieb, D. (1948). The utilization of carbon compounds by some actinomycetales as an aid for species determination. J. Bacteriol, 56(1), July, pp. 107-114.

Nonomura, H. (1974). Key for Classification and Identification of 458 Species of the Streptomycetes Included in ISP. J. Ferment. Technol, 52(2), pp. 87-92.

Jensen, H. J. (1930). Decomposition of keratin by soil microorganisms. J Agric Sci 20, pp. 390

Cowan, S.T. (1974). Cowan and steel

Nitsch, B. and Kutzner, H. J. (1969). Egg-yolk as a diagnostic medium for streptomycetes. Experientia, 25, pp. 113-116.

Hankin, L., Zucker, M. and Sands, M. (1971 ). Improved solid medium for the detection and enumeration of pectolytic bacteria. Appl. Microbiol, 22, pp. 205-209.

Reid, J.D. and Ogrydziak, D.M., (1981). Chitinase-overproducting mutant of Serratia marcescens. Appl.Environ. Microbiol, 41(3), pp. 664-669.

Jones, K. (1949). Fresh isolates of actinomycetes in which the presence of sporogenous aerial mycelia is a fluctuating characteristics, J. Bacteriol, 57(2), February, pp. 141-145.

Gordon, R.E. and Barnett, D.A. (1977). Resistance to rifampicin and lysozyme of strains of some species of Mycobacterium and Nocardia as a taxonomic tool. Int. J. Syst. Bacteriol. 27(3), Jully, pp. 176

Athalye, M., Goodfellow, M., Lacey, J. and White, R. P. (1985). Numerical classification of Actinomadura and Nocardiopsis. Int. J. Syst. Bacteriol. 35(1), January , pp. 86

Pospiech, A. and Neumann , B. (1995). A versatile quick-prep of genomic DNA from Gram-positive bacteria, Trends Genet 11(6), Jun, pp. 217-218.

Sambrook , J., Fritsch E. F. and Laniatis, T. (1989). Molecular cloning: A laboratory Manual, 2nd Edittion, Cold Spring Harbar Laboratory Press. New York.

Weisburg ,W. G., Barns , S. M., Pelletier , D. A. and Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol, 173, pp. 697

Kumar Tamura , S. K. and Nei, M. (2004). MEGA3: Integrated software for Molecular Evolutionary Genetic Analysis and sequence alignmen., Briefings Bioinformatics, 5 2), Jun, pp. 150

Thompson, J. D., Higgins, D.G. and Gibson, T.J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing, position specific gap penalties and weight matrix choice. Nucl. Acids Res, 22(22), November, pp. 4673

Jukes, T. H. and Cantor, C.R. (1969). Evolution of protein molecules. In: Munro, H.N. (Ed.), Mammalian Protein Metabolism, vol, 3. Academic Press, New York. pp, 21

Saitou, N., and Nei, M. (1987).The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4(4), Jully, pp. 406

Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39(4), Jully, pp. 783

Holt, J.G., Sharpe, M. E. and Williams, S.T. (1989). Bergey

Hall, T.A. (1999). BioEdit: a user

Nupur, M., Anoop, P., Pratibha, S., Manish, K. and Pradeep, B. (2012). Antimicrobial Compound from Streptomyces Isolate Characterized Using HPLC. Universal J. Env. Res. Technol. 2(4), August, pp. 242-246.

Shirling, E.B. and Gottlieb, D.( 1972). Cooperative description of type cultures of Streptomyces. V- Additional description. Int. J. Sys. Bacteriol. 22(4), October, pp. 265-394.

Wael, N.H., and Goodfellow, M. (2007). Nonomuraea aegyptia sp. nov., a novel actinomycete isolated from a sand dune. Antonie van Leewenhock. 92 (2), August, pp. 165-171.

Forar Laidi, R., Sifour, M., Mahmoud, S. and Hacene, H. (2008). A new actinomycete strain SK4-6 producing secondary metabolite effective against methicillin-resistance Staphylococcus aureus. World J. Microbiol. Biotechnol. 24, April, pp. 2235-2241.

Marilize, R. H. and Paul, R. M. (2009). Streptomyces polyantibioticus sp. nov., isolated from the banks of a river. Int. J. Sys. Evol. Microbiol, 59(6), Jun, pp. 1302-1309.

Reddy,T. V. K., Shaik, M., Mohammed, M. I. and Slawomir, C.( 2010). Streptomyces osmaniensis sp. nov., isolated from soil. Int. J. Sys. Evol. Microbiol, 60(8), August, pp. 1755-1759.

Yong Kim, B. Y., Tiago, X. R., Zucchi, D., Avinash, N. V., Ying Huang, B. and Goodfellow, M. (2012). Streptomyces herbaceus sp. nov.,Streptomyces incanus sp. nov. andStreptomyces pratens sp. nov., isolated from the soil of a hay meadow. Int. J. Syst. Evol Microbiol, 62(8), August, pp. 1908-1913.

Yan, B. L., Xin, Y.W., Ting, T.W., Shao, S. A., Peng, S. and Ge, H. W. (2013). Streptomyces ziwulingensis sp. nov., isolated from grassland soil

Lacey, J. (1987). Nomenclature of Saccharopolyspora erythraea Labeda 1987 and Streptomyces erythraeus (Waksman 1923) Waksman and Henrici 1948, and Proposals for the Alternative Epithet Streptomyces labedae sp. Nov. Int. J. Sys. Bacteriol. 37(4), p. 485.

Pridham, T.G., and Tresner, H.D. (1974). Genus I Streptomyces Waksman and Henrici. In Buchanan and Gibbons (Editors), Bergey

Young, M.D., Kempe, L. and Bader, L. (1985). Effect of phosphate, Glucose and Ammonium Growth and Lincomycin production by Streptomyces lincolnensis. in chemical defined media. Biotechnology and Bioengineering, 27 (3) March, pp. 327-333.

da Silva, I. R., Martins, M. K., Carvalho, C.M., Azevedo de, J.L. and de Lima Proc

Ibtisam, M. A., Zeinab, K A. A. and Nijla, A. A. M. (2013). Optimization of environmental and nutritional conditions to improve growth and antibiotic productions by Streptomyces Sp. Isolated from Saudi Arabia Soil. (IRJM) 4(8), September, pp. 179-187.

Downloads

Published

2013-11-24

How to Cite

Laidi, R. F., ABDERRAHMANE, A., & NORYA, A. A. . H. (2013). Identification and Antibiosis of a Novel Actinomycete Strain RAF-11 Isolated From Iraqi Soil. International Journal of Sciences: Basic and Applied Research (IJSBAR), 12(1), 141–159. Retrieved from https://gssrr.org/index.php/JournalOfBasicAndApplied/article/view/1210

Issue

Section

Articles